Does the 60 grit manticore leave deep gouges in the edge?
Good question.
I use and like the Manticore but have never seriously compared it to the scratches left by other abrasives, so can't fully answer your question. Of course, the steel composition of the blade is also a major factor, as is the observer's perception and definition of what "deep" is.
I recently used the Manticore to thin and sharpen the edge of a big Ontario fixed blade with 1075 steel. I looked at the edge through a 30X illuminated loupe and felt along the side of the edge with a fingernail. I do not consider these scratches to be deep and was actually surprised they weren't deeper, considering the low grit, but that is just my highly subjective opinion. Hopefully someone more qualified than I am to fully answer your question will chime in as I'd also like to know how the Manticore scratches compare to other abrasives.
I like coarse, toothy, working edges so am probably not as concerned with scratches as much as those who prefer smooth, polished edges. I finish sharpening at a higher grit, anyway, which of course will somewhat smooth out the 60 grit scratches.
For hogging off metal freehand I can usually get more pressure, control, and feedback taking the stone to the knife,
IF I can do it safely. On my finishing stones and strokes, where I want very little pressure, I'll usually take the knife to the stone. I consider these to be two different types of sharpening. But those are just my preferences. YMMV.