Varying or mismatched bevel widths are almost always due to asymmetry in the blade's primary grind, relative to the centerline of the spine. In essence, it's because the steel on one side of the centerline will be somewhat thicker than on the other side, either overall or in portions of the blade. When sharpened, the thicker side will reveal a wider bevel as compared to the bevel width seen on the thinner side of the blade, with both sides sharpened at exactly the same angle. It's very, very common; blades with perfect symmetry relative to the centerline, and therefore equally thick on each side, are rare. That's why you've seen only one knife come out evenly (your RAT 2), among the examples you've mentioned. I wouldn't worry too much about the smaller error on part of the guided sharpener, if there's even any significant sharpener error at all; instead, the blade's own primary grind is making the bigger difference about 99% of the time. There'll also be differences and asymmetry in the profiles ground into each side (hollow grinds, sabre grinds, swedges, etc), which will affect how the blade lays against the 'table' on the EP, or how it rests against the clamp in other guided sharpeners. All of that will impact the actual angle at which the blade gets sharpened on each side, and therefore will impact bevel width as well.
BTW, you can almost always see some of the factory's grind asymmetry by looking straight-on at the tip of most knives, under magnification. The 'shoulder' of a bevel on one side will usually be higher/lower than on the other, or the edges of sabre or hollow grinds will be offset from side-to-side. I seldom see any blade that looks perfectly symmetrical, side-to-side, when viewed this way. And it's more obvious and even hideously unbalanced when seen on larger, thicker blades.
David