For your situation you're looking for a purifier, not a filter, as per EPA. Something that will get rid of the nasty critters but will also take care of viruses, heavy metals, pesticides, etc. Obviously UV's not going to cut it as they won't remove the heavy metals and pesticides.
I believe that General Ecology's First Need water purifiers take care of heavy metals and pesticides, but you'll have to check it out further. It may be the only backpackable one on the market right now that may fit your need. From their website: "
General Ecology water purifiers utilize our unique, proprietary "Structured Matrix" chemical-free technology to offer the highest level of water purification instantly without chemicals, pretreatment, double pumping or hold time. General Ecology's water purifiers remove viruses, bacteria, and protozoa, plus many organic and inorganic chemical and aesthetic contaminants at the highest "purification" micron level (0.4 microns absolute) to provide great tasting water while protecting against water related disease. First Need Deluxe Water Purifiers like all General Ecology Water Purifiers are certified to meet EPA Microbiological Purification Standard against cysts, bacteria AND virus! "
I use a SteriPen Adventurer UV purifier, MSR Miox, Pur (now Katadyn) Hiker Pro, Sawyer Water Bottle Filter and Katadyn MP-1 chlorine dioxide tabs. None of those are going to do what you're asking for.
Just found this article about the Lifesaver bottle purifier, that may fit your needs, but you would have to look into it more, as I don't know it's stats:
http://www.foxnews.com/story/0,2933,354735,00.html
Nevermind! With price conversion it comes out to about $500!
Check out this website by the US Army from their comprehensive testing on commercially available purifiers and filters. It's the best study I've seen to date, but it's about 2 years old now and there have been quite a few new purifiers and filters since then:
http://chppm-www.apgea.army.mil/WPD/CompareDevices.aspx
As far as how to pack water in, I would go with water bladders, as they are light, inexpensive and nearly indestructable. Platypus makes their Water Tanks in 2, 4 and 6 litre sizes and they usually cost about $14-$18. Just keep in mind that water weighs more than 8lbs/gallon, so 3 gallons will be over 25lbs.
Koyote: Where do you hike around the Putah Creek area? I was just checking out Solano Park for some family camping.