Usually, in instances like this, the Fairies Guild requires large sums of money... a parcel of blood, sweat, and tears may or may not be helpful... depends on the Hammer Fairy's mood.
Two things:
1) Telling Bruce Wallace via e-mail and phone, short and sweet, you would like to put money in his pocket, is your best chance of getting a response. The difference between Sid and Bruce is, Bruce is trying to run a business, Sid is on a mission.
2) Dealing with pins and pin holes is problematic. Fairbanks pins are hard (harder than the arm material) and they are captured. Over time, Sid and Keri have evolved into using soft pins and not capturing them. The short story is the pin revolves (wears more evenly) and bushed arms (a pain to get done, especially on the upper arms) tend to stay same size and round. Sid has a longer story on this.
If I had to guess, your arm holes are egg shaped and your pins are flatter on one side. How "out" are they? It may be John Wallace is jigged-up to deal with it. It maybe Sid and Keri are jigged up to deal with it, too... not Fairbanks, but Little Giant, and it may be transferable. It is ALWAYS worth running hammer realities by Sid. If you can get him numbers, he will tell you where in relative hammer reality you are. Sid and Keri may not be willing to work on your hammer parts, though. In the end, if all you need is replacement pins, the hole and pin dimensions at the pin head and cotter will be as-made (non rotating pins won't wear there). Anyone with a lathe and and simple knowledge of running it can make you new pins. The dimensions need to be right. 1018, 1020, (4140 "pre-hardend", if you "have" to have hard pins)... but you should talk to Keri and Sid.
As Bruce asked, there are, for sure, bushings at the front and rear yoke, but I don't know what they are made of... brass/bronze probably, but they don't have to be. Did you find out how "out" the shaft is? It should be most of the wear is in the bushings and that is a simple fix for a good machinist. It would be helpful to know the original bushing/shaft dimension and spec tolerance but it is not essential. You might be able to get that from Bruce Wallace... there may be other places for the information. Hopefully the bushings have never turned for any length of time... having to bush the yokes back to round would be ugly.
You may be able to pull the drive disc/shaft with threaded rod. You may be able to push it out with threaded rod. Either way, you have to be able to support the disc drive or near/shaft as it comes.
Got to go...
Mike
PS ~ Yeah, I know, I sound like "an expert" (god save me from f'ing experts!). I'm in a hurry and I've still got lumps all over my head from beating it against our hammer. Over time (a long time) working on our hammer, little by little I learned by being taught, there are things that are real and things that are not. Anything I can do to help you avoid the "are nots", I will do.
Mike